The FooterAggregateFormatString functionality of the Grid does not affect the Aggregates values format in a client-bound Grid.
Code to reproduce:
<telerik:RadGrid RenderMode="Lightweight" ID="RadGrid1" runat="server" ClientDataSourceID="RadClientDataSource1" AllowPaging="true" AllowSorting="true" AllowFilteringByColumn="true" ShowFooter="true">
<MasterTableView ClientDataKeyNames="CustomerID" EditMode="Batch" CommandItemDisplay="Top" BatchEditingSettings-HighlightDeletedRows="true">
<Columns>
<telerik:GridBoundColumn DataField="CustomerID" HeaderText="Customer ID" Aggregate="Count" FooterAggregateFormatString="No currency sign here: {0:C}">
</telerik:GridBoundColumn>
<telerik:GridBoundColumn DataField="CompanyName" HeaderText="Company Name" ColumnEditorID="GridTextBoxEditor">
</telerik:GridBoundColumn>
<telerik:GridBoundColumn DataField="ContactName" HeaderText="Contact Name" ColumnEditorID="GridTextBoxEditor">
</telerik:GridBoundColumn>
<telerik:GridBoundColumn DataField="ContactTitle" HeaderText="Contact Title" ColumnEditorID="GridTextBoxEditor">
</telerik:GridBoundColumn>
<telerik:GridClientDeleteColumn HeaderText="Delete">
<HeaderStyle Width="70px" />
</telerik:GridClientDeleteColumn>
</Columns>
</MasterTableView>
<ClientSettings>
<ClientEvents OnUserAction="UserAction" />
</ClientSettings>
</telerik:RadGrid>